STAMP: Solid Tumor Associative Modeling in Pathology

by KatherLab · MCP Server · ★ 126

Last updated: · Indexed by AgentSkillsHub · Auto-synced every 8h

How to install STAMP

git clone https://github.com/KatherLab/STAMP.git

Taken from the project's README on GitHub. Check the security audit before running it.

Security audit verdict: SAFE · quality 61/100

None of the 42 rules matched — no credential harvesting, no data exfiltration, no curl-pipe-shell installer. Scanned against 42 published rules built on the SlowMist agent-security taxonomy, refreshed every 8 hours. Full audit →

The quality score combines nine heuristic checks of the repo and its README: completeness, clarity, specificity, examples, structure, agent readiness, step-by-step content, instruction quality and security notes. It rates how well the project explains itself to an agent, not the code.

agentsbioimage-analysisbioinformaticsdeep-learningdigital-pathologyheatmaps-visualization-toolhistopathologymcpmcp-serverpathology

Quick Facts

Stars126
Forks56
LanguagePython
CategoryMCP Server
LicenseMIT
Quality Score61/100
Open Issues12
Last Updated2026-08-20
Created2023-09-22
Platformsmcp, python
Est. Tokens~16k

About STAMP

STAMP: A Protocol for Solid Tumor Associative Modeling in Pathology An efficient, ready‑to‑use workflow from whole‑slide image to biomarker prediction. STAMP is an end‑to‑end, weakly‑supervised deep‑learning pipeline that helps discover and evaluate candidate image‑based biomarkers from gigapixel histopathology slides, no pixel‑level annotations required.

Compatible Skills

These tools work well together with STAMP for enhanced workflows:

  • llm_agents — semantic(0.28)+complementary+rare_topics+same_lang+similar_pop+shared_platform (59%)
  • Machine-Learning-Guide — semantic(0.21)+complementary+rare_topics+same_lang+similar_pop+shared_platform (57%)
  • LLM-VM — semantic(0.19)+complementary+rare_topics+same_lang+similar_pop+shared_platform (56%)
  • LLM-Tools — semantic(0.18)+complementary+rare_topics+same_lang+similar_pop+shared_platform (56%)
  • ClawBio — semantic(0.18)+complementary+rare_topics+same_lang+similar_pop+shared_platform (56%)

STAMP alternative? Top 6 similar tools

Looking for a STAMP alternative? If you're comparing STAMP with other mcp server tools, these 6 projects are the closest alternatives on Agent Skills Hub — ranked by topic overlap, star count, and community traction.

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  • pubmed-mcp-server by cyanheads · ⭐ 159

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How this security grade is produced

Grades come from a rule-based scan built on the SlowMist agent-security taxonomy: 42 published rules, covering credential harvesting, data exfiltration, curl | sh installers and more. It is a first-layer scan, not a manual audit — we say so rather than overstate it.

The scale of the problem is documented independently: Liu et al. (2026), in a study of 31,132 agent skills, report that 26.1% contain security vulnerabilities. Our own full-catalog census is published as a citable open dataset.

Sources & who's responsible:

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