biomcp — MCP Server by genomoncology

by genomoncology · MCP Server · ★ 497

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About biomcp

BioMCP BioMCP is a single-binary CLI and MCP server for querying biomedical databases. One command grammar, compact markdown output, 12 entities across 15+ data sources. Install PyPI tool install This installs the binary on your PATH. Binary install Install skills Install guided investigation workflows into your agent directory: MCP clients From source Quick start Command grammar Entities and sources MyVariant.info, ClinVar, gnomAD, CIViC, OncoKB, cBioPortal,

aibioinformaticsclinical-trialsgenomicsllmmcpmcp-servermedicalmodel-context-protocolpubmed

Quick Facts

Stars497
Forks100
LanguageRust
CategoryMCP Server
LicenseMIT
Quality Score53.664/100
Last Updated2026-05-01
Created2025-04-01
Platformscli, mcp, rust
Est. Tokens~2220k

Compatible Skills

These tools work well together with biomcp for enhanced workflows:

  • rust-sdk — semantic(0.25)+complementary+same_lang+similar_pop+shared_platform (54%)
  • BioClaw — semantic(0.36)+complementary+rare_topics+similar_pop (52%)

biomcp alternative? Top 6 similar tools

Looking for a biomcp alternative? If you're comparing biomcp with other mcp server tools, these 6 projects are the closest alternatives on Agent Skills Hub — ranked by topic overlap, star count, and community traction.

  • google_workspace_mcp by taylorwilsdon · ⭐ 2.3k

    Control Gmail, Google Calendar, Docs, Sheets, Slides, Chat, Forms, Tasks, Search & Drive with AI - Comprehensi

  • jadx-ai-mcp by zinja-coder · ⭐ 1.8k

    Plugin for JADX to integrate MCP server

  • ScienceClaw by beita6969 · ⭐ 613

    🔬🦞 A self-evolving AI research colleague for scientists. 285 skills, zero hallucination, persistent memory.

  • mcphub.nvim by ravitemer · ⭐ 1.7k

    An MCP client for Neovim that seamlessly integrates MCP servers into your editing workflow with an intuitive i

  • mcp-language-server by isaacphi · ⭐ 1.5k

    mcp-language-server gives MCP enabled clients access semantic tools like get definition, references, rename, a

  • nerve by evilsocket · ⭐ 1.3k

    The Simple Agent Development Kit.

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Frequently Asked Questions

What is biomcp?

biomcp is BioMCP: Biomedical Model Context Protocol. It is categorized as a MCP Server with 497 GitHub stars.

What programming language is biomcp written in?

biomcp is primarily written in Rust. It covers topics such as ai, bioinformatics, clinical-trials.

How do I install or use biomcp?

You can find installation instructions and usage details in the biomcp GitHub repository at github.com/genomoncology/biomcp. The project has 497 stars and 100 forks, indicating an active community.

What license does biomcp use?

biomcp is released under the MIT license, making it free to use and modify according to the license terms.

What are the best alternatives to biomcp?

The top alternatives to biomcp on Agent Skills Hub include google_workspace_mcp, jadx-ai-mcp, ScienceClaw. Each offers a different approach to the same problem space — compare them side-by-side by stars, quality score, and community activity.

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